[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 947 items for (author: thomas & dr)

EMDB-43683:
Cryo-EM structure of FLVCR2 in the inward-facing state with choline bound
Method: single particle / : Cater RJ, Mancia F

EMDB-43684:
Cryo-EM structure of FLVCR2 in the outward-facing state with choline bound
Method: single particle / : Cater RJ, Mancia F

PDB-8vzn:
Cryo-EM structure of FLVCR2 in the inward-facing state with choline bound
Method: single particle / : Cater RJ, Mancia F

PDB-8vzo:
Cryo-EM structure of FLVCR2 in the outward-facing state with choline bound
Method: single particle / : Cater RJ, Mancia F

EMDB-19735:
Full-length human cystathionine beta-synthase with C-terminal 6xHis-tag, basal state, helical reconstruction
Method: helical / : McCorvie TJ, Yue WW

EMDB-19736:
Full-length human cystathionine beta-synthase with C-terminal 6xHis-tag, basal state, single particle reconstruction
Method: single particle / : McCorvie TJ, Yue WW

EMDB-19737:
Full-length human cystathionine beta-synthase, basal state, helical reconstruction
Method: helical / : McCorvie TJ, Yue WW

EMDB-19738:
Full-length human cystathionine beta-synthase, basal state, single particle reconstruction
Method: single particle / : McCorvie TJ, Yue WW

EMDB-19739:
Full-length human cystathionine beta-synthase, basal state, partially degraded tetramer
Method: single particle / : McCorvie TJ, Yue WW

EMDB-19740:
Full-length human cystathionine beta-synthase with C-terminal 6xHis-tag, SAM bound, activated state, helical reconstruction
Method: helical / : McCorvie TJ, Yue WW

EMDB-19741:
Full-length human cystathionine beta-synthase with C-terminal 6xHis-tag, SAM bound, activated state, local helical reconstruction
Method: helical / : McCorvie TJ, Yue WW

EMDB-19742:
Full-length human cystathionine beta-synthase with C-terminal 6xHis-tag, SAM bound, activated state, local single particle reconstruction
Method: single particle / : McCorvie TJ, Yue WW

PDB-8s5h:
Full-length human cystathionine beta-synthase with C-terminal 6xHis-tag, basal state, helical reconstruction
Method: helical / : McCorvie TJ, Yue WW

PDB-8s5i:
Full-length human cystathionine beta-synthase with C-terminal 6xHis-tag, basal state, single particle reconstruction
Method: single particle / : McCorvie TJ, Yue WW

PDB-8s5j:
Full-length human cystathionine beta-synthase, basal state, helical reconstruction
Method: helical / : McCorvie TJ, Yue WW

PDB-8s5k:
Full-length human cystathionine beta-synthase, basal state, single particle reconstruction
Method: single particle / : McCorvie TJ, Yue WW

PDB-8s5l:
Full-length human cystathionine beta-synthase, basal state, partially degraded tetramer
Method: single particle / : McCorvie TJ, Yue WW

PDB-8s5m:
Full-length human cystathionine beta-synthase with C-terminal 6xHis-tag, SAM bound, activated state, helical reconstruction
Method: helical / : McCorvie TJ, Yue WW

EMDB-15525:
Cryo-EM structure of the RecA postsynaptic filament from S. pneumoniae
Method: helical / : Perry TN, Fronzes R, Polard P, Hertzog M

PDB-8amf:
Cryo-EM structure of the RecA postsynaptic filament from S. pneumoniae
Method: helical / : Perry TN, Fronzes R, Polard P, Hertzog M

EMDB-41374:
Antibody N3-1 bound to RBDs in the up and down conformations
Method: single particle / : Hsieh CL, McLellan JS

EMDB-41382:
Antibody N3-1 bound to RBD in the up conformation
Method: single particle / : Hsieh CL, McLellan JS

EMDB-41399:
Antibody N3-1 bound to SARS-CoV-2 spike
Method: single particle / : Hsieh CL, McLellan JS

PDB-8tm1:
Antibody N3-1 bound to RBDs in the up and down conformations
Method: single particle / : Hsieh CL, McLellan JS

PDB-8tma:
Antibody N3-1 bound to RBD in the up conformation
Method: single particle / : Hsieh CL, McLellan JS

EMDB-18916:
Cryotomogram of mature Vaccinia virus (WR) virion
Method: electron tomography / : Calcraft T, Hernandez-Gonzalez M, Nans A, Rosenthal PB, Way M

EMDB-18917:
Subtomogram average of the Vaccinia virus (WR) portal complex in mature virions
Method: subtomogram averaging / : Calcraft T, Hernandez-Gonzalez M, Nans A, Rosenthal PB, Way M

EMDB-18918:
Subtomogram average of the Vaccinia virus (WR) A4/A10 palisade trimer in mature virions
Method: subtomogram averaging / : Calcraft T, Hernandez-Gonzalez M, Nans A, Rosenthal PB, Way M

PDB-8r5i:
In situ structure of the Vaccinia virus (WR) A4/A10 palisade trimer in mature virions by flexible fitting into a cryoET map
Method: subtomogram averaging / : Calcraft T, Hernandez-Gonzalez M, Nans A, Rosenthal PB, Way M

EMDB-40856:
Single particle reconstruction of the human LINE-1 ORF2p without substrate (apo)
Method: single particle / : van Eeuwen T, Taylor MS, Rout MP

EMDB-40858:
Structure of LINE-1 ORF2p with template:primer hybrid
Method: single particle / : van Eeuwen T, Taylor MS, Rout MP

EMDB-40859:
Structure of LINE-1 ORF2p with an oligo(A) template
Method: single particle / : van Eeuwen T, Taylor MS, Rout MP

PDB-8sxt:
Structure of LINE-1 ORF2p with template:primer hybrid
Method: single particle / : van Eeuwen T, Taylor MS, Rout MP

PDB-8sxu:
Structure of LINE-1 ORF2p with an oligo(A) template
Method: single particle / : van Eeuwen T, Taylor MS, Rout MP

EMDB-29400:
Acinetobacter baylyi LptB2FG bound to lipopolysaccharide and a macrocyclic peptide
Method: single particle / : Pahil KS, Gilman MSA, Kruse AC, Kahne D

EMDB-29401:
Acinetobacter baylyi LptB2FG bound to lipopolysaccharide.
Method: single particle / : Pahil KS, Gilman MSA, Kruse AC, Kahne D

EMDB-29402:
Acinetobacter baylyi LptB2FG bound to lipopolysaccharide and RG6006
Method: single particle / : Pahil KS, Gilman MSA, Kruse AC, Kahne D

EMDB-29403:
Acinetobacter baylyi LptB2FG bound to lipopolysaccharide and a macrocyclic peptide
Method: single particle / : Pahil KS, Gilman MSA, Kruse AC, Kahne D

EMDB-29404:
Acinetobacter baylyi LptB2FGC
Method: single particle / : Pahil KS, Gilman MSA, Kruse AC, Kahne D

EMDB-42206:
Acinetobacter baylyi LptB2FG bound to Acinetobacter baylyi lipopolysaccharide
Method: single particle / : Pahil KS, Gilman MSA, Baidin V, Kruse AC, Kahne D

EMDB-42207:
Acinetobacter baylyi LptB2FG bound to Acinetobacter baylyi lipopolysaccharide and a macrocyclic peptide
Method: single particle / : Pahil KS, Gilman MSA, Baidin V, Kruse AC, Kahne D

PDB-8frl:
Acinetobacter baylyi LptB2FG bound to lipopolysaccharide and a macrocyclic peptide
Method: single particle / : Pahil KS, Gilman MSA, Kruse AC, Kahne D

PDB-8frm:
Acinetobacter baylyi LptB2FG bound to lipopolysaccharide.
Method: single particle / : Pahil KS, Gilman MSA, Kruse AC, Kahne D

PDB-8frn:
Acinetobacter baylyi LptB2FG bound to lipopolysaccharide and Zosurabalpin
Method: single particle / : Pahil KS, Gilman MSA, Kruse AC, Kahne D

PDB-8fro:
Acinetobacter baylyi LptB2FG bound to lipopolysaccharide and a macrocyclic peptide
Method: single particle / : Pahil KS, Gilman MSA, Kruse AC, Kahne D

PDB-8frp:
Acinetobacter baylyi LptB2FGC
Method: single particle / : Pahil KS, Gilman MSA, Kruse AC, Kahne D

PDB-8ufg:
Acinetobacter baylyi LptB2FG bound to Acinetobacter baylyi lipopolysaccharide
Method: single particle / : Pahil KS, Gilman MSA, Baidin V, Kruse AC, Kahne D

PDB-8ufh:
Acinetobacter baylyi LptB2FG bound to Acinetobacter baylyi lipopolysaccharide and a macrocyclic peptide
Method: single particle / : Pahil KS, Gilman MSA, Baidin V, Kruse AC, Kahne D

EMDB-40969:
Uncrosslinked nNOS-CaM oxygenase homodimer
Method: single particle / : Lee K, Pospiech TH, Southworth D

EMDB-40970:
DSBU crosslinked nNOS-CaM oxygenase homodimer
Method: single particle / : Lee K, Pospiech TH, Southworth D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more